PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51432.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family WRKY
Protein Properties Length: 346aa    MW: 37763.6 Da    PI: 6.794
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51432.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.41.9e-30163221259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver+++dp ++++tY+ eHnh+
  GAY51432.1 163 SDVWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERNRSDPGMFIVTYTAEHNHP 221
                 79*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MEVDWDLHAV VRGCNSSVNA TVTTTTATTT STTTSFKDDL DTTKIQSWFS VSPFSREQTS  60
GHLFTLADPF EARNAIEELH ELYKPFFPKS PQPISPKSSQ PISSSISSIT SSSSKEQTQF  120
KQQQPNNKQS HASSVTSSTT PRTKRRKNQL KRVCHVPAEG LSSDVWAWRK YGQKPIKGSP  180
YPRGYYRCSS SKGCLARKQV ERNRSDPGMF IVTYTAEHNH PAPTHRNSLA GSTRQKPFTP  240
QTVTSSDSNK PSSPTSSTKP TFSSLSPATS MEEDTVPQST NTESREIDLL EDEEEVELAV  300
SDVGISDDFF VGLEGLGSEE SLPDHFQASF GLPLAANSAA TAAGGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.11e-58WRKY family protein