PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY51248.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 360aa MW: 40492.1 Da PI: 7.008

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY51248.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.1	7.4e-36	49	192	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........sgy 82 lp+G++F+Ptd+el+ ++L++kve+k+ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ + + GAY51248.1 49 LPAGVKFDPTDQELI-DHLEAKVEAKDmvkphplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqggETR 145 799**********.99*****77776553333333766646******.555666799**************73334555544778 PP NAM 83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l GAY51248.1 146 WHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 192 ********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MSGSKSNLGT NISSSDLIDA KLEEHQLCGS KQCPGCGHKL EAKPDWLGLP AGVKFDPTDQ 60 ELIDHLEAKV EAKDMVKPHP LIDEFIPTIE GEDGICYTHP EKLPGVTRDG LSRHFFHRPS 120 KAYTTGTRKR RKIQTECDLQ GGETRWHKTG KTRPVMVNGK QKGCKKILVL YTNFGKNRKP 180 EKTNWVMHQY HLGQHEEEKE GELVVSKIFY QTQPRQCNWS EKSATTGEGS SDPNSRRDSG 240 SGSCSSKEMI PHRDHEVSGA QVAAAMSSYG AIDMQQLKSD HFSFVPFRKS FDEQQQQQQQ 300 QQQQHHKLGG RSASGLEELI MGCTSSSDIK EESSMTNPQE AEWLKYSSFW PDPDNQDHHG

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MSGSKSNLGT NISSSDLIDA KLEEHQLCGS KQCPGCGHKL EAKPDWLGLP AGVKFDPTDQ  60
ELIDHLEAKV EAKDMVKPHP LIDEFIPTIE GEDGICYTHP EKLPGVTRDG LSRHFFHRPS  120
KAYTTGTRKR RKIQTECDLQ GGETRWHKTG KTRPVMVNGK QKGCKKILVL YTNFGKNRKP  180
EKTNWVMHQY HLGQHEEEKE GELVVSKIFY QTQPRQCNWS EKSATTGEGS SDPNSRRDSG  240
SGSCSSKEMI PHRDHEVSGA QVAAAMSSYG AIDMQQLKSD HFSFVPFRKS FDEQQQQQQQ  300
QQQQHHKLGG RSASGLEELI MGCTSSSDIK EESSMTNPQE AEWLKYSSFW PDPDNQDHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-142	NAC family protein