PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY51146.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 764aa MW: 84060.9 Da PI: 6.452 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.9 | 2.7e-21 | 110 | 165 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+k +++t+eq++e+e+lF+++++p++++r++L+k+lgL rqVk+WFqNrR++ k GAY51146.1 110 RKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 165 7999************************************************9987 PP | |||||||
2 | START | 222.3 | 1.6e-69 | 283 | 503 | 5 | 206 |
HHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECTT. CS START 5 eaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevissg. 88 + ++el k+a+a+ p+W +s e++n+de++++f+ +++ +s+ea+r+ gvv+ +l++lv++++d++ qW+ +++ ka+t++vi+ g GAY51146.1 283 QGMEELKKMATAGGPLWIRSLetgrEILNYDEYVKEFSAENSsngksnRSIEASRDAGVVFVDLPKLVQSFMDVN-QWKAMFPclisKAATVDVICGGe 380 568999*******************************998889********************************.*********************** PP .....EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHH CS START 89 .....galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwll 181 ga+qlm+aelq+l+p+vp R+++fvRy++ql+a++w+ivdvS+d +++ ++s+++++++pSg+++e+ksngh+kvtwveh ++++ ++h ++ GAY51146.1 381 gpnrnGAVQLMFAELQMLTPMVPtREVYFVRYCKQLSAEQWAIVDVSIDKVEENI-DASLAKCRKRPSGCIVEDKSNGHCKVTWVEHLECQKGTVHTMY 478 *****************************************************98.9****************************************** PP HHHHHHHHHHHHHHHHHHTXXXXXX CS START 182 rslvksglaegaktwvatlqrqcek 206 rs+v+sgla+ga++w+ tlq qce+ GAY51146.1 479 RSIVNSGLAFGARHWMTTLQLQCER 503 ***********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 764 aa Download sequence |
MGVVDMSNNP PTSRTKDFFA SPALSLSLAG IFRGAGASAA ANNEVEEGYE GSGGAGGGSK 60 REETTVEISS ENSGHTRSRS DADFDGGGDG DDDDGDGDGD GDSKNKKKKR KKYHRHTAEQ 120 IREMEALFKE SPHPDEKQRQ QLSKQLGLAP RQVKFWFQNR RTQIKTIQER HENSLLKSEI 180 EKLREENKAM REAINKACCP NCGMATTSRD TSMTTEEQQL RIENARLKAE VEKLRAAVGK 240 CPPGATSTSS CSAGNDQENR SSLDFYTGIF GIDKSRIMEL VNQGMEELKK MATAGGPLWI 300 RSLETGREIL NYDEYVKEFS AENSSNGKSN RSIEASRDAG VVFVDLPKLV QSFMDVNQWK 360 AMFPCLISKA ATVDVICGGE GPNRNGAVQL MFAELQMLTP MVPTREVYFV RYCKQLSAEQ 420 WAIVDVSIDK VEENIDASLA KCRKRPSGCI VEDKSNGHCK VTWVEHLECQ KGTVHTMYRS 480 IVNSGLAFGA RHWMTTLQLQ CERLVFFMAT NVPTKDSSGV ATLAGRKSIL KLAQRMTWSF 540 CRAIGASSYH VWNKVTSKTG EDIRVSSRKN LNDPGEPLGV ILCAVSSVWL PVSPNVLFDF 600 LRDEAHRNEW DIMSNGGPVQ TIANLAKGQD RGNAVNIQTM KSKENSMWLL QDSYTNAYES 660 MVVYAPVDIT GMQSVITGCD SSNIAILPSG FSILPDGLES RPLVITSRQE EKITEGGSLL 720 SIAFQILTNN SPAAKLTMES VDSVNTLISC TLRNIKTSLQ CEDA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 106 | 111 | KKKKRK |
2 | 106 | 112 | KKKKRKK |
3 | 108 | 112 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79840.1 | 0.0 | HD-ZIP family protein |