PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY51124.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 347aa MW: 37853.2 Da PI: 7.0629

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY51124.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.2	0.00072	215	251	14	55
HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ +++ L +l+ + +K + a++L +A+ YI+ Lq GAY51124.1 215 EKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 251 56678888888888887.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MMAGNPSWWS MHPLNPHQLS SSSSPSLFPS QYVHGSSSSF PFNSLPDSQE QHPQSWSQLL 60 LSGLPSDDDG FNSTPISHFH QPKKFESWED HHLQIINPYS SSRVDVVDDV KQEAPQANNL 120 YLHGPGEFQA TAASNWPQIM PLSPRSCVTS LSSNILDFSH TKPADKKNNQ QHPDHSSECN 180 STATRGVSKK ARVQTPSSQT PLKVAQLLSL LVRKEKLGDR ITALHQLVSP FGKTDTASVL 240 LEAIGYIRFL QGQIEALSSP YLSTSPSASM RNQHCVHGDI NGAFPEAPGQ LLNDTCLKRK 300 EAPNQDGQGK PKDLRSRGLC LVPLSCTQQV GSDNGADFWA PALGGGF

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MMAGNPSWWS MHPLNPHQLS SSSSPSLFPS QYVHGSSSSF PFNSLPDSQE QHPQSWSQLL  60
LSGLPSDDDG FNSTPISHFH QPKKFESWED HHLQIINPYS SSRVDVVDDV KQEAPQANNL  120
YLHGPGEFQA TAASNWPQIM PLSPRSCVTS LSSNILDFSH TKPADKKNNQ QHPDHSSECN  180
STATRGVSKK ARVQTPSSQT PLKVAQLLSL LVRKEKLGDR ITALHQLVSP FGKTDTASVL  240
LEAIGYIRFL QGQIEALSSP YLSTSPSASM RNQHCVHGDI NGAFPEAPGQ LLNDTCLKRK  300
EAPNQDGQGK PKDLRSRGLC LVPLSCTQQV GSDNGADFWA PALGGGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	1e-60	bHLH family protein