PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY50527.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 494aa MW: 54076.9 Da PI: 7.0944

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY50527.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.4	1.2e-31	271	326	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ GAY50527.1 271 KARRCWSPDLHRRFVSALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 326 68****************************************************97 PP
2	Myb_DNA-binding	39.1	1.7e-12	273	324	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v a ++lGg t+k I + m g+t ++ks++qky+ GAY50527.1 273 RRCWSPDLHRRFVSALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 324 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MASHSELSLD CKPHSYSMLL KAFGDQAADH ETQKLEEVLA RLEEERFKID GLKRELPLCM 60 QLLTNAVEVS RQQLQAYRAT NQGPRPVLEE FMPLKNSSSE ISETKSQNIS DKANWMTTAQ 120 LWSQTGNNET KSQNTIAASP KETTTDIVGF NVISPKLALD TKQRNGGAFV PFSKERNSCP 180 SPTLRALPDL ALASPDKEMD HQDNRCSENE NGRRENLGNH NNNNKISNCN GGAVLHEQVK 240 GVAGNSTEGQ TNSNNPTNNN NNNNNNNTHR KARRCWSPDL HRRFVSALQM LGGSQVATPK 300 QIRELMKVDG LTNDEVKSHL QKYRLHTRRP SPSPQQAGAP APQLVVLGGI WVPSEYTTAA 360 AAAHSGTPAL YHHPSPHPPS HFCAASPVPQ DFYTTAAPAA PQPPPPLPPL SPAHHQLHLH 420 NQIHMYKATS QGHSSPESDI RGIGDRSESI EDGKSESSSW KGESGDNGVA ERKGLAALRE 480 DGEESNGSEI TLKF

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MASHSELSLD CKPHSYSMLL KAFGDQAADH ETQKLEEVLA RLEEERFKID GLKRELPLCM  60
QLLTNAVEVS RQQLQAYRAT NQGPRPVLEE FMPLKNSSSE ISETKSQNIS DKANWMTTAQ  120
LWSQTGNNET KSQNTIAASP KETTTDIVGF NVISPKLALD TKQRNGGAFV PFSKERNSCP  180
SPTLRALPDL ALASPDKEMD HQDNRCSENE NGRRENLGNH NNNNKISNCN GGAVLHEQVK  240
GVAGNSTEGQ TNSNNPTNNN NNNNNNNTHR KARRCWSPDL HRRFVSALQM LGGSQVATPK  300
QIRELMKVDG LTNDEVKSHL QKYRLHTRRP SPSPQQAGAP APQLVVLGGI WVPSEYTTAA  360
AAAHSGTPAL YHHPSPHPPS HFCAASPVPQ DFYTTAAPAA PQPPPPLPPL SPAHHQLHLH  420
NQIHMYKATS QGHSSPESDI RGIGDRSESI EDGKSESSSW KGESGDNGVA ERKGLAALRE  480
DGEESNGSEI TLKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-104	G2-like family protein