PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY50465.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family HRT-like
Protein Properties Length: 503aa    MW: 55767.3 Da    PI: 9.2967
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY50465.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like54.81.6e-17255285131
    HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                 iCGv l+dGs+C+r+P kgRKRC +HK  Ri
  GAY50465.1 255 ICGVSLDDGSICRRPPLKGRKRCTQHKSLRI 285
                 8**************************9997 PP

2HRT-like58.11.5e-18367397131
    HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                 iCGv  +dG++C+rqPvkgR RCeeHKGm+i
  GAY50465.1 367 ICGVESGDGTFCSRQPVKGRVRCEEHKGMKI 397
                 8****************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 503 aa     Download sequence    
CGGCSFEVAS IIKREECKRT KHDAHFSKWK ILVGASDWAD YLLGKEGADR YRVHNLPSTS  60
GPGVYELGIV ASRSRTDRID SDDVVVVYLG QADSVRTRLQ CYGRSGAHLN NNPSNGSGCF  120
DDIFSRRHAI AYRRAPMENK ADALNTESEL LSTFDYAWNK GSNGTRRHYD VLRKLNTIAS  180
DNIQFPQSIR KLLYFSQKPA GIKIKASKLP SKQNNCGTYA DEEGHSFFSQ IFKFTKSQPR  240
LVLERHVTDE DRTVICGVSL DDGSICRRPP LKGRKRCTQH KSLRISRSNP VKPPVIEEMC  300
TVSEEHKWRS TNGSNSNILG ASEYVRNVDF DANACNYSDS SEMSRSGRVQ PQVFSKRFTT  360
KPNSDTICGV ESGDGTFCSR QPVKGRVRCE EHKGMKIKGI KSKSAEEDKS NVYDAGSKLS  420
TFNEEDFCSA VCGAQTLNGS YCRRPVKGNT NCWQHSKQSS NKGSTNSPCK GWSSGGTSIC  480
GAPTHNGSYC KRTVKGGGSC WQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.18e-88HRT-like family protein