PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY50465.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | HRT-like | ||||||||
Protein Properties | Length: 503aa MW: 55767.3 Da PI: 9.2967 | ||||||||
Description | HRT-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HRT-like | 54.8 | 1.6e-17 | 255 | 285 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv l+dGs+C+r+P kgRKRC +HK Ri GAY50465.1 255 ICGVSLDDGSICRRPPLKGRKRCTQHKSLRI 285 8**************************9997 PP | |||||||
2 | HRT-like | 58.1 | 1.5e-18 | 367 | 397 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv +dG++C+rqPvkgR RCeeHKGm+i GAY50465.1 367 ICGVESGDGTFCSRQPVKGRVRCEEHKGMKI 397 8****************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 503 aa Download sequence |
CGGCSFEVAS IIKREECKRT KHDAHFSKWK ILVGASDWAD YLLGKEGADR YRVHNLPSTS 60 GPGVYELGIV ASRSRTDRID SDDVVVVYLG QADSVRTRLQ CYGRSGAHLN NNPSNGSGCF 120 DDIFSRRHAI AYRRAPMENK ADALNTESEL LSTFDYAWNK GSNGTRRHYD VLRKLNTIAS 180 DNIQFPQSIR KLLYFSQKPA GIKIKASKLP SKQNNCGTYA DEEGHSFFSQ IFKFTKSQPR 240 LVLERHVTDE DRTVICGVSL DDGSICRRPP LKGRKRCTQH KSLRISRSNP VKPPVIEEMC 300 TVSEEHKWRS TNGSNSNILG ASEYVRNVDF DANACNYSDS SEMSRSGRVQ PQVFSKRFTT 360 KPNSDTICGV ESGDGTFCSR QPVKGRVRCE EHKGMKIKGI KSKSAEEDKS NVYDAGSKLS 420 TFNEEDFCSA VCGAQTLNGS YCRRPVKGNT NCWQHSKQSS NKGSTNSPCK GWSSGGTSIC 480 GAPTHNGSYC KRTVKGGGSC WQH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G56780.1 | 8e-88 | HRT-like family protein |