PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY50462.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family HRT-like
Protein Properties Length: 503aa    MW: 56088.3 Da    PI: 9.5985
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY50462.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like54.91.4e-17260290131
    HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                 iCGv l+dGsvC+++Pv+ RKRC eH GmRi
  GAY50462.1 260 ICGVSLGDGSVCQMPPVEQRKRCIEHRGMRI 290
                 8*****************************7 PP

2HRT-like52.86.4e-17380410131
    HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                 iCGv l+ G++C+rqPvkgR RCe+HKG +i
  GAY50462.1 380 ICGVELGGGTFCTRQPVKGRVRCEQHKGWKI 410
                 8***************************775 PP

Sequence ? help Back to Top
Protein Sequence    Length: 503 aa     Download sequence    
MFVKGDENPV EAVVESICNI MVEKIIEKME AALLAIIARI QREDCERTNH DSQFSKWKEL  60
VGPSDWENHS HGKEGAERYK VHNLPNDTGP GLYELGIAVP GAGVIVVYVG QAESVRARLQ  120
AYGRTGAHLN SGCDSGRYFE DIFRRGYSIV YRSAPMKNKE DAEKTERKIL DKFDYAWNKG  180
NNGKRRHADV RRKLDEVASN NIQFPKTIRN LLRFNHWPAD IKIKASPEGH NFLPQIIKFT  240
KSQPRLVLDR YGADEGHTGI CGVSLGDGSV CQMPPVEQRK RCIEHRGMRI RASTLTMKGK  300
AKVCDVDPTK LPMVAQKCSV SEGEERNRRK NCGSNSKSTG SSQYGHDAYV DSNAPGALNS  360
PEMYRQGRVQ SKAKLQYDTI CGVELGGGTF CTRQPVKGRV RCEQHKGWKI QGTKSTSVAQ  420
DHKSDVYGAS YGSFVCGAQT LDGSYCRRQV KANTKCWQHS DKSLTIRSWS DWNYGGSSLC  480
GAPTRNGSSC RRSVKGGGRC WQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.11e-72HRT-like family protein