PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY50462.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HRT-like | ||||||||
Protein Properties | Length: 503aa MW: 56088.3 Da PI: 9.5985 | ||||||||
Description | HRT-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HRT-like | 54.9 | 1.4e-17 | 260 | 290 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv l+dGsvC+++Pv+ RKRC eH GmRi GAY50462.1 260 ICGVSLGDGSVCQMPPVEQRKRCIEHRGMRI 290 8*****************************7 PP | |||||||
2 | HRT-like | 52.8 | 6.4e-17 | 380 | 410 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv l+ G++C+rqPvkgR RCe+HKG +i GAY50462.1 380 ICGVELGGGTFCTRQPVKGRVRCEQHKGWKI 410 8***************************775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 503 aa Download sequence |
MFVKGDENPV EAVVESICNI MVEKIIEKME AALLAIIARI QREDCERTNH DSQFSKWKEL 60 VGPSDWENHS HGKEGAERYK VHNLPNDTGP GLYELGIAVP GAGVIVVYVG QAESVRARLQ 120 AYGRTGAHLN SGCDSGRYFE DIFRRGYSIV YRSAPMKNKE DAEKTERKIL DKFDYAWNKG 180 NNGKRRHADV RRKLDEVASN NIQFPKTIRN LLRFNHWPAD IKIKASPEGH NFLPQIIKFT 240 KSQPRLVLDR YGADEGHTGI CGVSLGDGSV CQMPPVEQRK RCIEHRGMRI RASTLTMKGK 300 AKVCDVDPTK LPMVAQKCSV SEGEERNRRK NCGSNSKSTG SSQYGHDAYV DSNAPGALNS 360 PEMYRQGRVQ SKAKLQYDTI CGVELGGGTF CTRQPVKGRV RCEQHKGWKI QGTKSTSVAQ 420 DHKSDVYGAS YGSFVCGAQT LDGSYCRRQV KANTKCWQHS DKSLTIRSWS DWNYGGSSLC 480 GAPTRNGSSC RRSVKGGGRC WQH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56780.1 | 1e-72 | HRT-like family protein |