PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY50282.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family WRKY
Protein Properties Length: 360aa    MW: 39747.6 Da    PI: 9.471
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY50282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY992.9e-31289346359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D ++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  GAY50282.1 289 DDFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPSMLVVTYEGEHNHS 346
                 99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MAVELMMEYG NTSHFTDKVE DCAVQEAASG LESVEKLINL LSQQQQVQQN NSHQSSPSSR  60
SSMDLENDCK AVADVAVSKF KRVISLLGRN RIGHARFRRA PVAAPCVDYQ QNQEKDKNLQ  120
QQEVEVIPET KVYYARPIQQ IPPLPPPPRN YHQHEFSTLV VPKNGVDLER KDSATTINFS  180
NYTSAGNSFV SSLTVTGDND NKQQPSSSSA SATFHFTNLS QQVSSAGKPP LSSSSLKRKC  240
SSASDNLASA KSCGVSSGRC HCTKKRKSRV KRVVRVPAVS LRLSDIPPDD FSWRKYGQKP  300
IKGSPHPRGY YKCSSVRGCP ARKHVERALD DPSMLVVTYE GEHNHSLSVA DTRNLILESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.13e-68WRKY family protein