PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY49672.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 419aa MW: 48046.4 Da PI: 8.4094

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY49672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.7	2e-35	5	132	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 +GfrF Ptdee++ + Lk k + +++ ++ike+d y +ePw+Lp +++++ee+ wyfF++ d kya++kr nr tk+g+Wk+tg+ ++++k ++e GAY49672.1 5 VGFRFYPTDEEII-RLLKMKRLDPGFSV-RTIKEIDFYGFEPWELPchSEIQSEEEVWYFFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKySTE 101 7**********.9999999999.88***********6448888999*********************************998889 PP NAM 99 lvglkktLvfykg.rapkgektdWvmheyrl 128 ++g+k++L f + +a+k kt+Wvmhe ++ GAY49672.1 102 VIGTKRILSFSRHdSASKKAKTEWVMHEIAV 132 9******764888999******875 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MNSLVGFRFY PTDEEIIRLL KMKRLDPGFS VRTIKEIDFY GFEPWELPCH SEIQSEEEVW 60 YFFCEPDYKY AKSKRVNRGT KEGTWKKTGN GSKIKRKYST EVIGTKRILS FSRHDSASKK 120 AKTEWVMHEI AVEDDPVYKK DFVVCRLERK RDQMKFGVVS AKRKQAKKLG VSTSDKDQPS 180 QNLTSKRKRD QKLGVSISDQ DQSSQNLTSK RNHLAEDTNR NHFTRKEDLV SNNNHVTENG 240 VLVSEVQARD HSISHSRNRV SENIVENSVE AEARQLLEFN PQGGGYTGLN DASFSALQSP 300 VYPEQESSCS NGSSYGSGLL NSQFDSEQVD GQFNSWRDFQ NKYSPDETGQ TTPDFFSSKS 360 DNGVYVEDGV YDNVKYQTGI SRSNLSPGAI CFSLITRKLY ETYWEHKIKH VALLIKEIY

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MNSLVGFRFY PTDEEIIRLL KMKRLDPGFS VRTIKEIDFY GFEPWELPCH SEIQSEEEVW  60
YFFCEPDYKY AKSKRVNRGT KEGTWKKTGN GSKIKRKYST EVIGTKRILS FSRHDSASKK  120
AKTEWVMHEI AVEDDPVYKK DFVVCRLERK RDQMKFGVVS AKRKQAKKLG VSTSDKDQPS  180
QNLTSKRKRD QKLGVSISDQ DQSSQNLTSK RNHLAEDTNR NHFTRKEDLV SNNNHVTENG  240
VLVSEVQARD HSISHSRNRV SENIVENSVE AEARQLLEFN PQGGGYTGLN DASFSALQSP  300
VYPEQESSCS NGSSYGSGLL NSQFDSEQVD GQFNSWRDFQ NKYSPDETGQ TTPDFFSSKS  360
DNGVYVEDGV YDNVKYQTGI SRSNLSPGAI CFSLITRKLY ETYWEHKIKH VALLIKEIY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07680.2	4e-30	NAC family protein