PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY49396.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 308aa MW: 34603.3 Da PI: 8.8598

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY49396.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.3	2.6e-52	18	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhP+d+elv++yL kkv++++ ++ ++ vd++k+ePwd+p+++ + kewyf+s+rd+kyatg r+nrat+sgyWkatgkd+++l+ kg+l GAY49396.1 18 LPPGFRFHPRDDELVCDYLMKKVTHTNESI--LLAAVDLNKCEPWDIPETACVGGKEWYFYSQRDRKYATGLRTNRATASGYWKATGKDRAILR-KGSL 113 79********************999666..79**********7777799***********************************9.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg++ktLvfy+grapkg+kt+Wvmhe+rle GAY49396.1 114 VGMRKTLVFYRGRAPKGKKTEWVMHEFRLE 143 ***************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MSSSNNSNNN IRMVEAQLPP GFRFHPRDDE LVCDYLMKKV THTNESILLA AVDLNKCEPW 60 DIPETACVGG KEWYFYSQRD RKYATGLRTN RATASGYWKA TGKDRAILRK GSLVGMRKTL 120 VFYRGRAPKG KKTEWVMHEF RLEGPFANSP KVSSLKEDWV LCRVFYKKRE VPGQPSMGSC 180 SYDDTGSSSL PPLMDSYITF NQTLPNFQDN YNELVSCFSI LSSSQQDQII TNNPIFTHFN 240 HSEPNNSIST KNSTTFGKNI PVGTDCLDPV ACDKKVIKAV LNQLTKIESN VPNMQGSSPS 300 LGEPIMKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-106	NAC family protein