PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY49067.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 597aa MW: 68096.5 Da PI: 8.2164

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY49067.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.3	1.9e-26	85	193	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.................tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 +fY+eYAk+vGF + +++s++s+ +g++++++fvC+++g+++e+++ +++ r +r+ ++t+Cka+++vk+++ dg+w + ++ GAY49067.1 85 SFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGNKRESSTVestevinmdsmtgipikKKRGRINRSWSKTDCKACMHVKRRQeDGRWIIRSF 183 5*************************************999988789*********99899999***************9***** PP FAR1 82 eleHnHelap 91 +eHnHe++p GAY49067.1 184 IKEHNHEIFP 193 *****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 597 aa Download sequence
MEDSRSNVNV DVVNANDEGS NRGGVTVNCL NVSDNNKENT RPKISRTVVD GRQKAYAGDE 60 INLNSIKTIE PLEGMEFESK EEAFSFYKEY AKSVGFATII KASRRSRISG KFIDAKFVCT 120 RYGNKRESST VESTEVINMD SMTGIPIKKK RGRINRSWSK TDCKACMHVK RRQEDGRWII 180 RSFIKEHNHE IFPDQAYYFR GHRNLDLEKC EEEAKADFET RHKQPGLKSP SPFGKQMVKM 240 YTHAIFKKFQ VEVLGVVACH PRKESEDGPT KTFKVQDFEE NQDFIVVWNE TTSDISCLCR 300 SFEFNGFLCR HVLIVLQMFG LHSIPLQYIL TRWTKDAKSG QTRREKSDVI KSRVQRYNDL 360 CWQAFKLGDE GSLSQESYNI VFSALEEALR KCETVNNSIQ TVTGSALPSH GPHDYEEVNQ 420 GNATPKTNKK NNIPNKRQLH PETDNITIGI HDCWQQMGHS NFHAPALECS YGTVERMQGM 480 EQLNSRAPTV DGYFGTPQIF QGMLNSMAPS RDDYYSNQQN MQGLGQLNSI APVNDAHYIT 540 QQRMHGMGQL HFRPQTTPTC FDIQDGLQDM DQSNVVVGPS QLHGTTSKHL QRKHLSR

Sequence ? help Back to Top

Protein Sequence Length: 597 aa Download sequence

MEDSRSNVNV DVVNANDEGS NRGGVTVNCL NVSDNNKENT RPKISRTVVD GRQKAYAGDE  60
INLNSIKTIE PLEGMEFESK EEAFSFYKEY AKSVGFATII KASRRSRISG KFIDAKFVCT  120
RYGNKRESST VESTEVINMD SMTGIPIKKK RGRINRSWSK TDCKACMHVK RRQEDGRWII  180
RSFIKEHNHE IFPDQAYYFR GHRNLDLEKC EEEAKADFET RHKQPGLKSP SPFGKQMVKM  240
YTHAIFKKFQ VEVLGVVACH PRKESEDGPT KTFKVQDFEE NQDFIVVWNE TTSDISCLCR  300
SFEFNGFLCR HVLIVLQMFG LHSIPLQYIL TRWTKDAKSG QTRREKSDVI KSRVQRYNDL  360
CWQAFKLGDE GSLSQESYNI VFSALEEALR KCETVNNSIQ TVTGSALPSH GPHDYEEVNQ  420
GNATPKTNKK NNIPNKRQLH PETDNITIGI HDCWQQMGHS NFHAPALECS YGTVERMQGM  480
EQLNSRAPTV DGYFGTPQIF QGMLNSMAPS RDDYYSNQQN MQGLGQLNSI APVNDAHYIT  540
QQRMHGMGQL HFRPQTTPTC FDIQDGLQDM DQSNVVVGPS QLHGTTSKHL QRKHLSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	8e-92	FAR1 family protein