PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY48891.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 391aa    MW: 41649.9 Da    PI: 8.1029
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY48891.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.13.2e-083313701255
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 RR ri  ++ +L++l+P+     +k  s +++L +Av++Ik Lq
  GAY48891.1 331 RRTRISRKLKKLQDLVPNM----DKQTSYSDMLDLAVQHIKGLQ 370
                 9*****************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MYHHPSSSSS SQQNPMGPTT AAGVGGSGGL TRYVSAPGSL LRTAVDSIIG SSSSSPSPSQ  60
PSIVSSSHSH QHHHYFAGGS TTTAGGDSSP VSSFTTTEST CKVNSSNAPG NNTKSGLQRS  120
YGLNEIPQTH AASSSLLRQR SSPAGFLSHF ASENVGFSVT RETGNYNSQG RSSGGLGVSR  180
LKSQLSFTGQ DSLSQISEES ENGIDGVSSG SGRQNATHSY STASFGMDSW ENGTSIVFSA  240
PPSKRTKTLD GDIFNCLNAL DSQFTMPQTS LEMATVDNLL NIPEDSVPCK IRAKRGCATH  300
PRSIAERLSL WFVDFGMFDN SRVLANLVTE RRTRISRKLK KLQDLVPNMD KQTSYSDMLD  360
LAVQHIKGLQ NQVENLHKDL EHCTCGCKPT S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.15e-75bHLH family protein