PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY48207.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 28631.4 Da PI: 8.7044 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 94.6 | 1.5e-29 | 5 | 76 | 54 | 127 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg +k++ + ++ g+kk Lvfy g+apkg kt+W+mheyr GAY48207.1 5 GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGAEKPIGK--PKTLGIKKALVFYAGKAPKGIKTNWIMHEYR 76 689************************************98..778***************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MARYGEKEWY FFSPRDRKYP NGSRPNRAAG SGYWKATGAE KPIGKPKTLG IKKALVFYAG 60 KAPKGIKTNW IMHEYRPANV HRSPATKNNL RLDDWVLCRL YNKKGRMEKH YPSDQKSIGF 120 PELEEDRKPN INISRQEVAL GMPPHQGSPV PMMNDLLNMD TSDSVPRLQT DSSCSEHVLS 180 PEIACDKEVQ SVPKWNDLGN ALNDDYNQFS FNYMDTNSFQ DDPFGPQVQY QMDQLSPYQD 240 LFMILQKPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 3e-87 | NAC family protein |