PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY48206.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 305aa MW: 35099.9 Da PI: 6.871 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.2 | 1.1e-51 | 9 | 132 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeelv++yL++k++g ++++ +i+e+d+yk++Pw+Lp++++ +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg +k++ + ++ GAY48206.1 9 LPPGFRFHPTDEELVNHYLCRKCAGLPISV-PIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGAEKPIGK--PKT 104 79****************************.88***************8888899*************************************98..778 PP NAM 100 vglkktLvfykgrapkgektdWvmheyr 127 g+kk Lvfy g+apkg kt+W+mheyr GAY48206.1 105 LGIKKALVFYAGKAPKGIKTNWIMHEYR 132 ***************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence |
MMKGAELELP PGFRFHPTDE ELVNHYLCRK CAGLPISVPI IAEIDLYKYD PWELPEMARY 60 GEKEWYFFSP RDRKYPNGSR PNRAAGSGYW KATGAEKPIG KPKTLGIKKA LVFYAGKAPK 120 GIKTNWIMHE YRPANVHRSP ATKNNLRLDD WVLCRLYNKK GRMEKHYPSD QKSIGFPELE 180 EDRKPNINIS RQEVALGMPP HQGSPVPMMN DLLNMDTSDS VPRLQTDSSC SEHVLSPEIA 240 CDKEVQSVPK WNDLGNALND DYNQFSFNYM DTNSFQDDPF GPQVQYQMDQ LSPYQDLFMI 300 LQKPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-123 | NAC family protein |