PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY47921.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | WRKY | ||||||||
Protein Properties | Length: 303aa MW: 33824.2 Da PI: 4.5468 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101 | 7.1e-32 | 117 | 173 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s++prsYY+Ct ++C++kk+vers +dp++++itYeg H h GAY47921.1 117 DDGYKWRKYGQKSIKNSPNPRSYYKCTNPRCSAKKQVERSCDDPDTLIITYEGLHLH 173 8******************************************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MEKENDSWFE DDELVRELLD DETPFFVLPE EPTDEANRYS SPSNNEDQAT LKLVTSSAVY 60 SGPTIEDIDN ALSVAAGQEQ YSQAISKARI SLFEGGLGKI ENKYTLKIKS WANGMADDGY 120 KWRKYGQKSI KNSPNPRSYY KCTNPRCSAK KQVERSCDDP DTLIITYEGL HLHFAYPYFI 180 LNQPQPQASP TTTKRKRTNP QAEETKEQIL DMQQNSSPSS FSNNNTECPS ASEAMSPQGL 240 LEDVVPLMIR NPTGNNSNNN NNVSSNTSSC SSYRSPPTSP SSLSWSPNYS LSCFDMGINT 300 IIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43290.1 | 5e-53 | WRKY family protein |