PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY47631.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ARR-B | ||||||||
Protein Properties | Length: 445aa MW: 49716.8 Da PI: 5.4357 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 66.2 | 5.7e-21 | 251 | 300 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kpr++Wt+eLH +F+eav++L G kA Pk il+ m+v+gLt +v+SHLQ GAY47631.1 251 KPRIVWTSELHLKFIEAVSSL-GDIKARPKLILQKMNVPGLTQRQVASHLQ 300 79*******************.8999************************* PP | |||||||
2 | Myb_DNA-binding | 34.6 | 4.4e-11 | 255 | 300 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 WT e+++++++av lG ++k+I ++m+ g+t q+ s++q GAY47631.1 255 VWTSELHLKFIEAVSSLGDIkaRPKLILQKMNvPGLTQRQVASHLQ 300 6*****************66************************98 PP | |||||||
3 | Response_reg | 26.9 | 2.4e-10 | 3 | 81 | 29 | 107 |
ESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHH CS Response_reg 29 addgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeel 107 ++ ++ al l+++++ ++l++ ++++++d l +++ + +ee +pii+++++ +e +al Ga fl+Kp++ ++l GAY47631.1 3 TELASVALSLIRKEKdrFELVMANVDISNIDSLSFVRVLVKEE--IPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDL 81 56677889999777778**********************9988..********************************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 445 aa Download sequence |
TTTELASVAL SLIRKEKDRF ELVMANVDIS NIDSLSFVRV LVKEEIPIIL MSSRRNEIFS 60 WRALVEGACF FLEKPISFDD LKYVWQHSYI YKRRSQIQLE DARKPEQEIL LNRGNISQGK 120 RINEGGDDVS RNIANASATD DLRYSINTDQ NEKNNKQMEV DAQVHIFDEN SVKESQNACN 180 MEQHLVMAND QIQEQGGLIK TKRSLDDDRG GEKKRNLNSD NENSNSFMVP TEETGKEMNE 240 NNNGHVKKKR KPRIVWTSEL HLKFIEAVSS LGDIKARPKL ILQKMNVPGL TQRQVASHLQ 300 ISDNVIRDLS SNTGSLQTLE RIKPSVVGQP TLNSNDFAAA GKTQGAGTVQ VENASGISSN 360 VANSGKSLKQ FSEGNQEVKA IAVLEPPAAS SVNAGKSAYA ALLKFLDEDE EEIRAGLGGE 420 LKPADLDRYC EWLREALMEK SEHSE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 247 | 252 | KKKRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 1e-18 | ARR-B family protein |