PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY47610.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 237aa MW: 25863.8 Da PI: 7.0864 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.4 | 1.4e-14 | 82 | 127 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 hn+ ErrRRdriN+++ L+el+P++ K + a++L Av+Y+k L GAY47610.1 82 VHNQSERRRRDRINKRLKSLKELVPNC-----NKSDRASVLDDAVNYVKAL 127 5*************************8.....699**************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MNNQVPWNFS VASGDSEKGQ SSGNENSFDF LESSASQLPT SWHQTSHSLD TDVDDFSDAT 60 EISEGMERKP DNRPKRTHSA EVHNQSERRR RDRINKRLKS LKELVPNCNK SDRASVLDDA 120 VNYVKALRHQ LEMMSAQGGA IFQSPFMSPS GHQSTEVPQI SPNVPISPKL GMGSGIGTGM 180 VDVLFSWSSR DIIGSLGQSA SFISSRCRLA TNACIQKSCS LSNANAMCSF TTLASIC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 87 | 92 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09530.2 | 9e-20 | bHLH family protein |