PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY47359.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 362aa MW: 40456.3 Da PI: 4.3555

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY47359.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29	1.8e-09	305	339	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 + +yp+++++ LA+++gL++rq+ +WF N+R ++ GAY47359.1 305 NWPYPTEADKVALAESTGLDQRQINNWFINQRKRH 339 669*****************************885 PP
2	ELK	27.5	7e-10	259	280	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 E K+ L rKY+gy+++Lk+EFs GAY47359.1 259 ETKDNLIRKYGGYISTLKHEFS 280 7899999**************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MDELLYGTLH STSVDYSLQQ QQQEAALGNM VSWGSYQNNN NNNNNNNDDD DDDDNIVAYG 60 GEHEIGNISA VYGSEPEQMG SGNNSSSSSD AASSLMVAVA EIQRNNTTSS EEQVSSAIRA 120 QIASHPLYPK LLQAYIDCQK VGASPEIANV LDDIRREGDV SNRNCVVSSC CWGADPELDE 180 FMGTYCDILV KYKSDLSKPY NEASSFLNNM ETQLSNLCNV VSRSHGSDEA DPGGSWEEDL 240 SGGETEVSEC FRMPPVDRET KDNLIRKYGG YISTLKHEFS KKKKKGKLPK EARQILFDWW 300 NLHYNWPYPT EADKVALAES TGLDQRQINN WFINQRKRHW KPSESVQFNL MDSVCGPIVI 360 ND

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MDELLYGTLH STSVDYSLQQ QQQEAALGNM VSWGSYQNNN NNNNNNNDDD DDDDNIVAYG  60
GEHEIGNISA VYGSEPEQMG SGNNSSSSSD AASSLMVAVA EIQRNNTTSS EEQVSSAIRA  120
QIASHPLYPK LLQAYIDCQK VGASPEIANV LDDIRREGDV SNRNCVVSSC CWGADPELDE  180
FMGTYCDILV KYKSDLSKPY NEASSFLNNM ETQLSNLCNV VSRSHGSDEA DPGGSWEEDL  240
SGGETEVSEC FRMPPVDRET KDNLIRKYGG YISTLKHEFS KKKKKGKLPK EARQILFDWW  300
NLHYNWPYPT EADKVALAES TGLDQRQINN WFINQRKRHW KPSESVQFNL MDSVCGPIVI  360
ND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-102	TALE family protein