PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY47125.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NF-YA
Protein Properties Length: 356aa    MW: 38118.7 Da    PI: 7.9091
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY47125.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA1025.4e-32183239158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep+YVNaKQy +Il+RRq+Rak+e ekkl +k rkpylheSRh+hA+rR+RgsgGrF
  GAY47125.1 183 QEPVYVNAKQYMGILRRRQARAKAELEKKL-IKVRKPYLHESRHQHAMRRARGSGGRF 239
                 69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MRSKSERTNQ LEPDPNAIPP GAAYTEPWWR GVGYNSISPA LAGANVSNSS SLDCPNGSES  60
NDAKSISNDG LNEEDDDANK ESQATASSRS VCACISDLGA GNHGQKNQNV QQGASAMPTI  120
RDECFTQPPQ LELVGHSIAC ASNPYQDPYY GGMMAAYGHQ PVGYPQFVGM PHARMPLPLE  180
MAQEPVYVNA KQYMGILRRR QARAKAELEK KLIKVRKPYL HESRHQHAMR RARGSGGRFA  240
KKTDDASKGN SEKKGGGSGI RPSLSGSSSG SEPVPSDSAE TWNSSASQQD VGGSQAHNMH  300
EARNHANANG GYQNHGLQAS TYHSHLGDRG ETGDCSGKQW GSISSNQASQ RPLAIQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.13e-86NF-YA family protein