PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY47112.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 383aa MW: 43657.8 Da PI: 5.1383

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY47112.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	129.3	2.9e-40	16	143	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevlskkg 97 ppG+rF P d+el+++yLkkkv +++l+ + i +v++yk+ P +L+ + k +eke++fF++rd+k+++g+r+nr+t sg+Wkat dkev+ +g GAY47112.1 16 PPGIRFCPLDDELIMCYLKKKVMNEPLPP-NRIMDVQLYKFSPAQLEvMYKKRREKEMFFFTQRDRKHQNGSRPNRVTGdsSGFWKATSGDKEVKF-NG 112 9***********************999.77**********94444557789***************998779*********9.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 e +g kktL+fyk +++++ekt+W+mhe+r+ GAY47112.1 113 EIIGFKKTLAFYKRTSNSTEKTNWIMHEFRA 143 9**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MESSIDNDIS YLDSFPPGIR FCPLDDELIM CYLKKKVMNE PLPPNRIMDV QLYKFSPAQL 60 EVMYKKRREK EMFFFTQRDR KHQNGSRPNR VTGDSSGFWK ATSGDKEVKF NGEIIGFKKT 120 LAFYKRTSNS TEKTNWIMHE FRAEDNPPPS KKHGIDMKLD WVLCRIYHRG SKSKRADQAS 180 EEDQYHGDDQ SVDQPIQLNP NINELVVISR EYNNPSMEME KPPSILPQEG QSFVEISQSG 240 NPMQNNAIAT NTQYANPSHD NTLANDNVAA NFTQHADPSQ NNSLDPNAFV SAMQFSSDIP 300 YNYANASSLD NMHHQLPLQS GFLEIAQPSN SMIAMDAELQ AFAVITESLL SPLPQASVYP 360 FKSSYARNDP LWMPTLPEFQ NDF

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MESSIDNDIS YLDSFPPGIR FCPLDDELIM CYLKKKVMNE PLPPNRIMDV QLYKFSPAQL  60
EVMYKKRREK EMFFFTQRDR KHQNGSRPNR VTGDSSGFWK ATSGDKEVKF NGEIIGFKKT  120
LAFYKRTSNS TEKTNWIMHE FRAEDNPPPS KKHGIDMKLD WVLCRIYHRG SKSKRADQAS  180
EEDQYHGDDQ SVDQPIQLNP NINELVVISR EYNNPSMEME KPPSILPQEG QSFVEISQSG  240
NPMQNNAIAT NTQYANPSHD NTLANDNVAA NFTQHADPSQ NNSLDPNAFV SAMQFSSDIP  300
YNYANASSLD NMHHQLPLQS GFLEIAQPSN SMIAMDAELQ AFAVITESLL SPLPQASVYP  360
FKSSYARNDP LWMPTLPEFQ NDF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	65	70	KKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	7e-43	NAC family protein