PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY47037.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 387aa MW: 42910.3 Da PI: 7.4803

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY47037.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.5	5.3e-32	217	272	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r+ W+peLH+rF++a++qLGGs+ AtPk+i+elm+v+gLt+++vkSHLQkYRl+ GAY47037.1 217 KQRRSWSPELHRRFLHALQQLGGSHAATPKQIRELMNVDGLTNDEVKSHLQKYRLH 272 79****************************************************97 PP
2	Myb_DNA-binding	44.6	3.4e-14	219	270	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r +W++e++ ++++a +qlGg t+k I + m+ g+t ++ks++qky+ GAY47037.1 219 RRSWSPELHRRFLHALQQLGGShaaTPKQIRELMNvDGLTNDEVKSHLQKYR 270 678***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MDYAEKMQRC HEYVEALEEE KRKIQVFQRE LPLCLELVTQ AIQACRRELS GTTTEYMHVQ 60 SECSEQTSSD GPILEEFIPI KRSSSHDDND NDNDDRHSNR PTTTNNNREK EKNSDKKKSD 120 WLRSVQLWNQ SPDPQPKEEE VVPRKATVVE VKRNGSGGAF QPFHREKCGE KKDQQQRLGK 180 VNTPVPTAAA SSTTDTAVGK GEKNDKDKDK EGQPQRKQRR SWSPELHRRF LHALQQLGGS 240 HAATPKQIRE LMNVDGLTND EVKSHLQKYR LHTRRPSPAM HNGGNPQAPQ FVVVGGIWVQ 300 APDYAAVAAK APGEAGSIAT SNGIYAPVAA PPPAVPQSSA SVVQISQQTQ SEHLQSEERG 360 SHSDGGHHAN SPATSSSTHT TTTSPVF

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MDYAEKMQRC HEYVEALEEE KRKIQVFQRE LPLCLELVTQ AIQACRRELS GTTTEYMHVQ  60
SECSEQTSSD GPILEEFIPI KRSSSHDDND NDNDDRHSNR PTTTNNNREK EKNSDKKKSD  120
WLRSVQLWNQ SPDPQPKEEE VVPRKATVVE VKRNGSGGAF QPFHREKCGE KKDQQQRLGK  180
VNTPVPTAAA SSTTDTAVGK GEKNDKDKDK EGQPQRKQRR SWSPELHRRF LHALQQLGGS  240
HAATPKQIRE LMNVDGLTND EVKSHLQKYR LHTRRPSPAM HNGGNPQAPQ FVVVGGIWVQ  300
APDYAAVAAK APGEAGSIAT SNGIYAPVAA PPPAVPQSSA SVVQISQQTQ SEHLQSEERG  360
SHSDGGHHAN SPATSSSTHT TTTSPVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	9e-95	G2-like family protein