PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY46470.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 569aa MW: 62635.7 Da PI: 7.5013

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY46470.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.1e-30	315	373	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+++d +++++tYeg+Hnh+ GAY46470.1 315 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAsGCPVRKQVQRCSQDRTILITTYEGNHNHP 373 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MDNSVGLLFD TAAAAICKRD IIMAKDNDLI NGEDHRDEKR VVNEMNFFAH DDSQHHHLKA 60 SDDRQETFRV DRVKTESSSA FDEHEERIKL DINTGLNLST ANTTNERSRN VDTGISSRNI 120 EHKKHDKKIK LAVLRADLNK MSVENQRLRS LLNQVNNDYR ALQLHLCALT QREPTGKLAG 180 STAGREMING ENVGVARQFM DLGQAGKDDH KVSLCNSSED TTRFREFKIV ESMEARSDDE 240 IVALDDHQMG KRNISDRTER EVTPDDGQRA KKVARFNNNN SSRDVEQAAS QSQTTSLIRR 300 ARVSVRARSE ASMISDGCQW RKYGQKMAKG NPCPRAYYRC TMASGCPVRK QVQRCSQDRT 360 ILITTYEGNH NHPLPPAAMS MASTTSAAAS MLLSGSMPSA DGLIMSPNLL AKNNVLPFSP 420 SSASLSASAP FPTVTLDLTH SPNPLQFQRP LGQFHFTSPN NLPHNFVPMS HGLGPALIDN 480 NYQSNFLGLL SSLGLEHPYD SAQNRIQAAS LISDNISAAT AAITSDPGFT AALVSAIASI 540 IGNNDHQNHN GNNNSPSTAR NTSEKIEQS

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MDNSVGLLFD TAAAAICKRD IIMAKDNDLI NGEDHRDEKR VVNEMNFFAH DDSQHHHLKA  60
SDDRQETFRV DRVKTESSSA FDEHEERIKL DINTGLNLST ANTTNERSRN VDTGISSRNI  120
EHKKHDKKIK LAVLRADLNK MSVENQRLRS LLNQVNNDYR ALQLHLCALT QREPTGKLAG  180
STAGREMING ENVGVARQFM DLGQAGKDDH KVSLCNSSED TTRFREFKIV ESMEARSDDE  240
IVALDDHQMG KRNISDRTER EVTPDDGQRA KKVARFNNNN SSRDVEQAAS QSQTTSLIRR  300
ARVSVRARSE ASMISDGCQW RKYGQKMAKG NPCPRAYYRC TMASGCPVRK QVQRCSQDRT  360
ILITTYEGNH NHPLPPAAMS MASTTSAAAS MLLSGSMPSA DGLIMSPNLL AKNNVLPFSP  420
SSASLSASAP FPTVTLDLTH SPNPLQFQRP LGQFHFTSPN NLPHNFVPMS HGLGPALIDN  480
NYQSNFLGLL SSLGLEHPYD SAQNRIQAAS LISDNISAAT AAITSDPGFT AALVSAIASI  540
IGNNDHQNHN GNNNSPSTAR NTSEKIEQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	1e-71	WRKY family protein