PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY46202.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 271aa    MW: 30766.2 Da    PI: 7.0695
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY46202.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.18.4e-2017058127
         NAM  58 wyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                 +yfF++rd+ky++g+r++r +  +g+Wka+gk +ev +  + l+  k++Lv+y+g+ +k++ktdW+m+e+ 
  GAY46202.1   1 MYFFTPRDRKYPEGERPKRsVDGNGFWKASGKAEEVEN-FDILIAKKRSLVYYQGSCKKPKKTDWLMQEFF 70 
                 5******************6677*************99.999***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MYFFTPRDRK YPEGERPKRS VDGNGFWKAS GKAEEVENFD ILIAKKRSLV YYQGSCKKPK  60
KTDWLMQEFF MTGSSSSSAR KGRPHNMKLD DWVLCKVYKN KKRDKEEDGG HPVAFPNSST  120
VVGESSELPM MQKLNSNVPA QSPNLLHRSQ AMHAISSQMS TYNNGQNGFQ MPAAMLHSHE  180
VQATSSQMPT YYNGQNFLLL NGGHEDTLWQ QNNSHHHVDS KTNNQPEGID MINNVPNEDT  240
FWCGFLSSDN GDYSEPIDFG GVPNLDYMKS Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.19e-24NAC family protein