PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY45914.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 484aa MW: 54515.6 Da PI: 6.2925

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY45914.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	14.6	5.7e-05	426	454	26	54
-HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 26 saeereeLAkklgLterqVkvWFqNrRak 54 +e++++L +++gL+ +q+ +WF N+R + GAY45914.1 426 HEEDKARLVQETGLQLKQINNWFINQRKR 454 578999*********************87 PP
2	ELK	28.6	3.2e-10	350	371	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ GAY45914.1 350 ELKHELKQGYKEKIVDIREEIL 371 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MFYDVESTLQ ASRTTTILPD LPLHHFTDQQ QQQQQQPPSP PQQQHHQHQQ SIETTAPNWL 60 NSALLRSQQA QQQAAHFSDT NFLNLRTTAN NNNSNNNNTA SDSDASQTPN QWLSRTSSSL 120 LHRNHSDVID DVTPANDSII AAVESADLKN ANSENMNNAS TNNKSEGVVV ESGADGVVNW 180 QNARYKAEIL SHPLYEQLLS AHVACLRIAT PVDQLPRIDA QLAQSQHVVS KYSALGAGQG 240 LVTDDKELDQ FMTHYVLLLC SFKEQLQQHV RVHAMEAVMA CWEIEQSLQS LTGVSPGEGT 300 GATMSDDDED QVDSDANLFD GSLEGPDTMG FGPLIPTESE RSLMERVRQE LKHELKQGYK 360 EKIVDIREEI LRKRRAGKLP GDTTSVLKSW WQSHSKWPYP TVSPVTLLLR FLFKSLPLRH 420 SMMLIHEEDK ARLVQETGLQ LKQINNWFIN QRKRNWHSNP STSTVLKSKR KRSNAGENSS 480 DRYM

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MFYDVESTLQ ASRTTTILPD LPLHHFTDQQ QQQQQQPPSP PQQQHHQHQQ SIETTAPNWL  60
NSALLRSQQA QQQAAHFSDT NFLNLRTTAN NNNSNNNNTA SDSDASQTPN QWLSRTSSSL  120
LHRNHSDVID DVTPANDSII AAVESADLKN ANSENMNNAS TNNKSEGVVV ESGADGVVNW  180
QNARYKAEIL SHPLYEQLLS AHVACLRIAT PVDQLPRIDA QLAQSQHVVS KYSALGAGQG  240
LVTDDKELDQ FMTHYVLLLC SFKEQLQQHV RVHAMEAVMA CWEIEQSLQS LTGVSPGEGT  300
GATMSDDDED QVDSDANLFD GSLEGPDTMG FGPLIPTESE RSLMERVRQE LKHELKQGYK  360
EKIVDIREEI LRKRRAGKLP GDTTSVLKSW WQSHSKWPYP TVSPVTLLLR FLFKSLPLRH  420
SMMLIHEEDK ARLVQETGLQ LKQINNWFIN QRKRNWHSNP STSTVLKSKR KRSNAGENSS  480
DRYM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	452	472	RKRNWHSNPSTSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	0.0	TALE family protein