PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY45821.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 289aa MW: 33846.6 Da PI: 7.2562

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY45821.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.6	1.7e-11	210	254	1	44
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC....TTS-STCHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkas.kapskKlsKaeiL 44 +r++h ++Er+RR+++N+ +++Lr+l+P+a+ + ++ ++ +++L GAY45821.1 210 QRMTHIAVERNRRRQMNDHLNTLRSLMPPAYvQRVKQSNNPSDVL 254 79***************************6523333335555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MEKLQGPINP YFLGDHLSVE CFEQEFINTG ALRFEFEEED EEGPQFTTTP SLEDKMPFLQ 60 MLQSVGTPSV FPFKEPNFQT LLRLQHLKKP WELVSPFMPE MEETQIQALE FESCVTQETL 120 DLHSPVKLET KDLQNPHSVT SCIEGLSSES NQEHIQVQPN SDSVINITHP PQQQIRAKQS 180 QFSKSPPITR EKRKRKRTKP IKNKEEVESQ RMTHIAVERN RRRQMNDHLN TLRSLMPPAY 240 VQRVKQSNNP SDVLNITTKV SFFLSFPRYY ISLKIRFLFS IFFGWWFKG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	193	200	RKRKRTKP
2	211	222	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61950.1	1e-28	bHLH family protein