PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY45779.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 247aa MW: 28729 Da PI: 4.6953 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.7 | 4.9e-19 | 32 | 86 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++f++eq++ Le +Fe++ + +++ +LAk+lgL+ rqV +WFqN+Ra++k GAY45779.1 32 KNKRRFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWK 86 56779*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 117.9 | 5.6e-38 | 33 | 124 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+eq+++LE +Fe+e++Lep++K +la+eLglqprqva+WFqn+RAR+k+kqlE+dy+ L++++++l+++ e+L+ke+++L +l++ GAY45779.1 33 NKRRFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQK 124 79************************************************************************************999886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MLDGGEYSPA AEPYSCMNEI TTTTTTRKKK CKNKRRFSDE QIRSLELMFE NETRLEPRKK 60 LQLAKELGLQ PRQVAIWFQN KRARWKSKQL ERDYNILQAN FNNLASRFEA LKKEKQALVI 120 QLQKTNELLQ NKPRREDQSP SERQCCGQVE GVNSMESELD NGDRDTNKCE SEVKPSLSAE 180 LRLGVLSDDD SSIKTEYFGL HEDEPNLMTM VEPAESSMTS PEDWGNFESD GLFDQSSSEY 240 QWWDFWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 3e-78 | HD-ZIP family protein |