PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY45629.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | WRKY | ||||||||
Protein Properties | Length: 403aa MW: 44484.9 Da PI: 4.7521 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.6 | 7.1e-30 | 207 | 265 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp++ ++ Y+g+H+h+ GAY45629.1 207 ADLWAWRKYGQKPIKGSPYPRNYYRCSSSkGCAARKQVERSNTDPNIYIVSYTGDHTHP 265 699************************998****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 403 aa Download sequence |
MGEKFPAKAA DNWDLQAVVR CFSSANNTTA NYTPQIDTTT SGAAAAADES SLEDPLAFLA 60 TMKFDEDDDP FSFPNLFENK NIGFQELEDS YKPFYSTPSS APEGLINHQQ QQQQLQLNSS 120 IVSPMSSSSF PPFVIGEQNN QQTHYVQQPL QQQDPQIHQQ KQQQLPIRLS SAIPLRPAMP 180 SHAHRSRKRK SPIKKMVCQV TEEKLSADLW AWRKYGQKPI KGSPYPRNYY RCSSSKGCAA 240 RKQVERSNTD PNIYIVSYTG DHTHPRPTHR NSLAGSTRNK FSGTQNHPVS TTPPPPPLPP 300 PTSSSSPLSA TCQSPSAPTT PAVDEEMSSI ENILANAADH DKDTSKTLME EEEEEEEDDD 360 DDDDLFEDLL IPNLAAPGID EDFFKGLKQF GSTAASGSGD NHG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 186 | 191 | SRKRKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52830.1 | 3e-55 | WRKY family protein |