PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY45574.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | WRKY | ||||||||
Protein Properties | Length: 382aa MW: 42243.6 Da PI: 5.6385 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.2 | 8.1e-29 | 136 | 197 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK++ g+++pr+YYrCt++ gC ++k+v+rs+edp+++eitY+g+H++ GAY45574.1 136 LDDGCSWRKYGQKDILGAKYPRGYYRCTYRngqGCLATKQVQRSDEDPTIFEITYRGNHTCA 197 58***************************99999**************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 382 aa Download sequence |
MDRNMGEWEK NSLINVLLQG RESAKQLQIQ LNLRTSSSSH DQTRGIMLVQ KIISSYEKAL 60 SMLNFCGSSS STQEPQPPVG PVTESPTSLT GSPLSEDSDR DVKDPQEDVS KKSRKTFPRW 120 THKVRVNPGA GLEGPLDDGC SWRKYGQKDI LGAKYPRGYY RCTYRNGQGC LATKQVQRSD 180 EDPTIFEITY RGNHTCAQAS NAILPPPTQP ETKEPDTAAI EPQQHNYYQT TPQQQPEDAL 240 LNLRKGLKIV TEDLDVKPQQ QSSIPPFHFP SPSVVIHPNF TGNFSPSFVS PQASEANNYT 300 FSTSPPSGMN NFQGNQNFQS SSQDSEVNEI ISGAAAAAAT SATNPPTVDL DFPFGNIEFD 360 PNFTFDNLGF FSSFHHSEKN SK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 5e-63 | WRKY family protein |