PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY45465.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

YABBY

Protein Properties

Length: 230aa MW: 25638.7 Da PI: 6.882

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY45465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	208.1	3.1e-64	8	170	5	170
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklse 103 ++eq+Cy+ CnfCn +lavsvP +sl+ +vtvrCGhC++l svn+a a q l+ ++ +++ e + + + + + +++ + ++++k + GAY45465.1 8 VAPEQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVHHHQAPSYASPECRIDLGSSS--KCNNKISAMRTPTNK-AT 103 689************************************************99996444444444444444433222..222222222233322.33 PP YABBY 104 nedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +e+ r p PekrqrvPsayn+fikeeiqrika+nPdishreafs+aaknWahfP+ihfgl GAY45465.1 104 EERVVNRRESPHSTTPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGL 170 444444455567889************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MSSCGIDVAP EQLCYIPCNF CNIVLAVSVP CSSLLDIVTV RCGHCSNLWS VNMAAAFQSL 60 SWQDVHHHQA PSYASPECRI DLGSSSKCNN KISAMRTPTN KATEERVVNR RESPHSTTPE 120 KRQRVPSAYN QFIKEEIQRI KANNPDISHR EAFSTAAKNW AHFPHIHFGL MLEANNQPKL 180 DDLLSNLNYK IDDISPSSDW LLGTASCQGQ RFEINDSAET SGPHHQVFSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26580.1	2e-83	YABBY family protein