PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY45248.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 266aa MW: 30141.1 Da PI: 6.7816 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.2 | 9.5e-06 | 158 | 197 | 11 | 55 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rR +++ +++ L++l+ + +K + a++L++A YIk Lq GAY45248.1 158 RRSQKLSDKITALQKLVSPY-----GKTDTASVLQEASLYIKLLQ 197 7999**************99.....9****************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 266 aa Download sequence |
MPYLANSMQV DSLVTNVHRN DFLMDSKLSK DDNQLRDGGF AISYQSLVNC QQGIQSITTS 60 CDNVSPQSFL LSRMRSLPQF DVDFESQQNE RTHAIEATDL LPQEGVCANL ALNKAALKVS 120 KKINNKKKTK LNSFCEEQWR HQVNDTTTRI QEHRVPVRRS QKLSDKITAL QKLVSPYGKT 180 DTASVLQEAS LYIKLLQEQI QMLSGSYNSL QVQVQVLHSL EMGEEQLDLR SRGLCLVPIS 240 FSQKVTQEDL LESHSTSRNT MVDTEF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G31730.1 | 1e-22 | bHLH family protein |