PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY45016.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 143aa MW: 16575.7 Da PI: 8.6858 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 128.3 | 6.1e-40 | 1 | 123 | 7 | 128 |
NAM 7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglk 103 F+Pt++e+++++L++k++g+ ++ ++i++++i+ +ePw+Lp ++++ +++ewyfFs+ +kkya+++r r+tk g Wk tg d+++ ++ ++e++g+k GAY45016.1 1 FRPTEDEIITYFLQNKIHGHASRV-RAINTLNICAFEPWELPeQAATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNcGKEVIGVK 98 9********************999.89***************445555889**************************************988889**** PP NAM 104 ktLvfykgrapkgektdWvmheyrl 128 k Lvf+kg+ +k++kt+Wv+hey+ GAY45016.1 99 KNLVFHKGHGSKAKKTSWVIHEYHS 123 ***********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
FRPTEDEIIT YFLQNKIHGH ASRVRAINTL NICAFEPWEL PEQAATPDDE EWYFFSELQK 60 KYANSDRVDR TTKVGSWKVT GGDRQIWDNC GKEVIGVKKN LVFHKGHGSK AKKTSWVIHE 120 YHSSKASIHQ AISSVLYNLF FFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49530.1 | 2e-35 | NAC family protein |