PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY44956.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | WRKY | ||||||||
Protein Properties | Length: 501aa MW: 54412.9 Da PI: 8.2997 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.5 | 8.6e-31 | 273 | 331 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ GAY44956.1 273 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGNHNHP 331 7*********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 501 aa Download sequence |
MEKQQQRREL ALLHSGDFLR RNSDHRMMEN SINRDKPPIQ EMDFFSSNNN QLHDQERKIE 60 SSTLVLDSGV NIGLNLHTSC SGISRTANDD KSHTELSELK GELQRLHEEN RKLRNMLDQT 120 TKSYNDLQSQ LLLAMQKLAH GSPQGQVNLK AGAFNGMPSP LMLAQQFMDP RPSAALNVNE 180 PSVSDDKTRE LSASPANTAE VISKELDHPL TKNNIPGKQV SNSEDGAETS QSWGSPKSPK 240 LDHQPKNDEQ VSEVPFRKAR VSVRARSEAP LISDGCQWRK YGQKMAKGNP CPRAYYRCTM 300 AVGCPVRKQV QRCAEDRTIL ITTYEGNHNH PLPPAATAMA NTTSAAAAML LSGSSTSKDG 360 LTSSGFFHSV PFASTMATLS ASAPFPTITL DLTQSPNPMQ FLRGPSSSST FPLPLHGYPQ 420 LLRYGPAAGM PNNMQLGQRH ASMVETVTAA ITSDPNFTAA LAAAISTIIG SNNGNNGNNG 480 TSGMQPGSPQ LPQSCTTFST N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01720.1 | 1e-104 | WRKY family protein |