PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY44869.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | WRKY | ||||||||
Protein Properties | Length: 322aa MW: 35572.9 Da PI: 8.6026 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 109 | 2.3e-34 | 169 | 226 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCtsa+C+vkk+vers +dp++v++tYeg+Hnh+ GAY44869.1 169 EDGYRWRKYGQKAVKDSPFPRSYYRCTSASCNVKKRVERSYTDPSIVVTTYEGQHNHP 226 8********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MERKEVTKTK NHNNMGSSPF ADHLSTGSQL RGVFDLYEGE KGSLGFMELL GVQDFGSSSP 60 PPSSLFDMVQ FQAQNQVPSK GASASSTVNV TKIECSELLN QPATPNSSSI SSASSEALND 120 EQVKVEEHVH DEQNQQKTKK QLKPKKTNQK RQREPRFAFM TKSEVDHLED GYRWRKYGQK 180 AVKDSPFPRS YYRCTSASCN VKKRVERSYT DPSIVVTTYE GQHNHPSPLL PRPTLGGVPH 240 AGNGVVGSSF GMPMPAAFSQ QQLPSLVNSL LPMNFGSSFI NGPTTASFLH ERRFCTPAAG 300 TDLLKDHGLL QDIVPSHMLR EE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47260.1 | 2e-62 | WRKY family protein |