PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY44842.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family WRKY
Protein Properties Length: 274aa    MW: 31079.3 Da    PI: 4.8976
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY44842.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.95.5e-3056114259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d ++++itY+++Hnh+
  GAY44842.1  56 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCRTDASMLIITYTSSHNHP 114
                 699***********************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MDDSLSPKLD TQSEVSEPQA ETHQASSKRR KVTEKTVVKV KIGENPGKLK NEGPPSDFWS  60
WRKYGQKPIK GSPYPRGYYR CSTSKGCSAK KQVERCRTDA SMLIITYTSS HNHPCPDLHT  120
INLTKQSKET PQNHQPTGTE FEDHHPTSAP TQEQQLPQEE EKQNEPPIIT TPTAEDSNED  180
HFHYLQSPIR CPQDIIISQE DPFTGNLEKP NETLNLLLDE EPVSYQNLMA FSTPKSEEND  240
FFDELGELPS TSSVFTSFMR SNDLFDERIP VVPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.12e-34WRKY family protein