PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY44736.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 143aa MW: 15946.5 Da PI: 9.5013

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY44736.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.8	0.0001	33	72	10	54
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + R +++ +++ L++l+ + +K + a++L +A+eYI+ L GAY44736.1 33 KERKEKLGERIIALQQLVSPY-----GKTDTASVLWEAMEYIQFL 72 677888889999999999998.....9****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
MMENKRSPCA VDQGSLPTLT SKRHKADLSI SAKERKEKLG ERIIALQQLV SPYGKTDTAS 60 VLWEAMEYIQ FLHEQVKVLS APYLQSMPAA KVQELEQYSL RNRGLCLVPI SCTAGVARSN 120 GADIWAPIKT TSPKFEKAIT QFH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05710.3	1e-68	bHLH family protein