PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY44541.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Trihelix

Protein Properties

Length: 292aa MW: 33161.2 Da PI: 5.7019

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY44541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	36.9	9.3e-12	19	87	2	70
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ +e l L++ +e + ++ + ++W+ +s+ + + + r+++qC+ kw++l +ykki +++ GAY44541.1 19 WSSKEALILVNEIAAVEADCLKALSSYQKWKIISETCTALDVPRTANQCRRKWDSLLDEYKKIIVRSRT 87 **************************************************************9776665 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MEGGSSGTRR TRSQVGPDWS SKEALILVNE IAAVEADCLK ALSSYQKWKI ISETCTALDV 60 PRTANQCRRK WDSLLDEYKK IIVRSRTFPN SQTQTHTDCF PPNFDSELFK AIHDFVMSKD 120 NRSDDTDPDS DTDPEADFSE AISQAQLGSK RQRRQSMCVK QCVEQKLLKS CLHENHQKGG 180 CSEEKLCNSH VEEEPRVRLV EKKCQNSRIK EKKSLKSCLV ENEQMMVAKL QENAELIHAI 240 VAESADYSDA DLNNVQDLQS EFVRRQGDKL IACLGEIVNT LNQFTDHVQE CK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	7e-55	Trihelix family protein