PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY44335.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | WRKY | ||||||||
Protein Properties | Length: 253aa MW: 28275 Da PI: 8.898 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 90.1 | 1.8e-28 | 93 | 153 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ k+++ pr+Y+rC++a gCpvkkkv+r+ ed+++++ tYegeHnh+ GAY44335.1 93 VKDGHQWRKYGQKVTKDNPSPRAYFRCSMAssGCPVKKKVQRCMEDKSFLVATYEGEHNHD 153 58**************************9999****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MMILQMKLLQ AKLEHVRKQN ENLRHLVKAM NNQCNDLLAR IHEANRTYSS SDHHHFNNNI 60 NIGGVTAQVP PVPNAKQSRI FVKADSKDSS LIVKDGHQWR KYGQKVTKDN PSPRAYFRCS 120 MASSGCPVKK KVQRCMEDKS FLVATYEGEH NHDVQCSSLG QSSSLTNYCS PKSSIVHCPD 180 YQTTDSFGSD VTLDLTLSGS NQETRPPRNL MQVCDDKKKI EEYVASLTKD PSFTIAVADA 240 VASSINGPPH RPM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 3e-39 | WRKY family protein |