PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY44334.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family WRKY
Protein Properties Length: 321aa    MW: 35896.2 Da    PI: 7.6194
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY44334.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.11.2e-30156215159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rsaedp++++ tYegeHnh+
  GAY44334.1 156 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSAEDPSILVATYEGEHNHP 215
                 58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MDSTWVDTSL DLNLNLLNHS SEVPKREFKG DHFAEFEERA SVKQETGILV EELNRISTEN  60
KKLNEMLSIL CKNYNNLRQQ YMDLMNKNTE NEVGISKKRK AESEDHCHTI GFNVHATESS  120
TSTDEESCKR PKDNNTKAKV SRFYVRASDS NSTLIVKDGY QWRKYGQKVT RDNPSPRAYF  180
KCSFAPSCPV KKKVQRSAED PSILVATYEG EHNHPQPTDS KAELSLSPSH VATIGNPIHV  240
SAASSMLSAS PTATLDMIQP GFLFDDAKKS SVQQIEAPAI HQILVQQMAS NLTKDPNFTA  300
ALAAAISGRF ADQARTQRWS L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.16e-87WRKY family protein