PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY44309.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

ARR-B

Protein Properties

Length: 671aa MW: 74234.3 Da PI: 6.4416

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY44309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	60.4	3.7e-19	199	242	1	45
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtleh 45 kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+ GAY44309.1 199 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVEKLTREN 242 79*****************.******************987 PP
2	Myb_DNA-binding	24.8	4.9e-08	201	240	1	37
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-H CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtl 37 r W+ e++ ++v av+qlG + +k+I m+ +++t+ GAY44309.1 201 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvEKLTR 240 678*******************************977777 PP
3	Response_reg	76.3	1.1e-25	17	125	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl vdD+p+ + ll+++l++ +y +v++++++ al+ll+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++++g+++++ + + Ga GAY44309.1 17 VLAVDDDPTCLLLLETLLRRCQY-HVTTTSQAITALKLLRENKnkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSGNGDPKLVMKGITHGAC 111 799******************.***********888888***************87754.558******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +eel + GAY44309.1 112 DYLLKPVRIEELKN 125 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 671 aa Download sequence
MTVEHVNGDQ FPSGLRVLAV DDDPTCLLLL ETLLRRCQYH VTTTSQAITA LKLLRENKNK 60 FDLVISDVHM PDMDGFKLLE LVGLEMDLPV IMLSGNGDPK LVMKGITHGA CDYLLKPVRI 120 EELKNIWQHV VRRKKIDAKD QNNSDNQDKP HNGSGQAEGM GNSDQNGKLN KKRKDQNEDE 180 DDEDDEDDHN HEDPTTQKKP RVVWSVELHR KFVAAVNQLG IDKAVPKKIL DLMNVEKLTR 240 ENKYRLYLKR ISCVANQQAN MVAALGSSDP SYLRMSSVNG LGNYHTVGGP GQFQNSTFRS 300 FPASGMLGRL NAPAGLGMHG LPSSGMIPMR HAQNSDNTTN DQGKFHPALL PGSHSGNILQ 360 GMPTSLELDQ LQLNKNITSI SELPNTKDNT TFHVSSGFPD ARIGFGRSTN PLLDVNNNPL 420 FLEGHPQEAH SNKMFGNQSL MSLNSGSSSR LPDHGRCNDN WSSAVQSSGI QPNSFSLGGD 480 YKQPTLHPGH LRDNLSTMAL PIGNSPCDVS SLHPLSNRFQ DPKADLQFQA VQDAPCRSNV 540 MFSPLNSAVS INGDVGPLGQ CLDTNKTFFH RSNEFDSLGQ SNFVDHFSMK INEVQRSSMQ 600 ASSNLKEGYL MGQQKTQGSY ISTSVDSLED LFMSSMVKEV FDDDVILLLQ EQDKDLRLHK 660 SVFSVSFGRE K

Sequence ? help Back to Top

Protein Sequence Length: 671 aa Download sequence

MTVEHVNGDQ FPSGLRVLAV DDDPTCLLLL ETLLRRCQYH VTTTSQAITA LKLLRENKNK  60
FDLVISDVHM PDMDGFKLLE LVGLEMDLPV IMLSGNGDPK LVMKGITHGA CDYLLKPVRI  120
EELKNIWQHV VRRKKIDAKD QNNSDNQDKP HNGSGQAEGM GNSDQNGKLN KKRKDQNEDE  180
DDEDDEDDHN HEDPTTQKKP RVVWSVELHR KFVAAVNQLG IDKAVPKKIL DLMNVEKLTR  240
ENKYRLYLKR ISCVANQQAN MVAALGSSDP SYLRMSSVNG LGNYHTVGGP GQFQNSTFRS  300
FPASGMLGRL NAPAGLGMHG LPSSGMIPMR HAQNSDNTTN DQGKFHPALL PGSHSGNILQ  360
GMPTSLELDQ LQLNKNITSI SELPNTKDNT TFHVSSGFPD ARIGFGRSTN PLLDVNNNPL  420
FLEGHPQEAH SNKMFGNQSL MSLNSGSSSR LPDHGRCNDN WSSAVQSSGI QPNSFSLGGD  480
YKQPTLHPGH LRDNLSTMAL PIGNSPCDVS SLHPLSNRFQ DPKADLQFQA VQDAPCRSNV  540
MFSPLNSAVS INGDVGPLGQ CLDTNKTFFH RSNEFDSLGQ SNFVDHFSMK INEVQRSSMQ  600
ASSNLKEGYL MGQQKTQGSY ISTSVDSLED LFMSSMVKEV FDDDVILLLQ EQDKDLRLHK  660
SVFSVSFGRE K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-135	ARR-B family protein