PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY44239.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | YABBY | ||||||||
Protein Properties | Length: 174aa MW: 19329.9 Da PI: 9.3991 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 149.5 | 3.2e-46 | 14 | 155 | 5 | 163 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklse 103 +se++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l ++ + q+ +++ l+++e++ n+ k +as+s ss + GAY44239.1 14 PQSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRP-PQQGPSQM------------SLRFQEKQSFCNDFKLGNASSSSSS----T 95 679************************************985533332.23334433............4555555555566666665555554....4 PP YABBY 104 nedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 +++ +p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafs+aaknWa + GAY44239.1 96 SSEPLSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARY 155 55667899999***********************************************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MNLEDNISTD LQVPQSEHLC YVRCNFCNTV LAVGIPCKRL LDTVTVKCGH CSNLSFLSTR 60 PPQQGPSQMS LRFQEKQSFC NDFKLGNASS SSSSTSSEPL SPKAPFVVKP PEKKHRLPSA 120 YNRFMKEEIQ RIKAANPEIP HREAFSTAAK NWARYIPNSL AGSTSGSSSH VRDR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 6e-65 | YABBY family protein |