PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY44164.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 226aa MW: 25732.3 Da PI: 10.208 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 112.3 | 5.3e-35 | 42 | 161 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lp G+rF+P+ +el+++yL kk++g++l++ ++i+e+d+y ++P++Lp +++k ++ e yfF++ k +r t+sgyWk tg+d ++ls ++ GAY44164.1 42 LPLGYRFSPRGNELITHYLIKKISGQQLPA-NIIREIDLYAFDPHQLPiSEFKYGKPdEAYFFTRPGK--------RRRTSSGYWKPTGRDLPILS-GK 130 699***************************.89***************756555444499***99865........566899**************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + vg k++L+fy+g+ap+g kt Wv+he+r+ GAY44164.1 131 AIVGFKRILIFYEGKAPRGIKTPWVVHEFRV 161 9****************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MALLDIVSYS QQTSGATSNN NLLAYSISGG RGSNQDDEEY NLPLGYRFSP RGNELITHYL 60 IKKISGQQLP ANIIREIDLY AFDPHQLPIS EFKYGKPDEA YFFTRPGKRR RTSSGYWKPT 120 GRDLPILSGK AIVGFKRILI FYEGKAPRGI KTPWVVHEFR VNPLYFSAIR RNKLDEDVNA 180 KVTRVESYIV CKIRYKRQRQ SDKCGTSSKT QKANQSAAES PLKETV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 2e-34 | NAC family protein |