PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY44136.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

CAMTA

Protein Properties

Length: 973aa MW: 108629 Da PI: 5.4005

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY44136.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176.8	2.7e-55	13	126	4	116
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywl 101 e ++rwlk+ e++ iL+n++k+elt+e++++p+sgsl+L+n++++r+frkDG++w+kkkdg++v E+he+LKvg+ e+l+cyYah+e+np+fqrr+yw+ GAY44136.1 13 EaQTRWLKPAEVLFILQNYDKYELTQEPPQKPNSGSLFLFNKRVLRFFRKDGHNWRKKKDGRAVGEAHERLKVGNAEALNCYYAHGEQNPNFQRRSYWM 111 5599********************************************************************************************* PP CG-1 102 Leeelekivlvhyle 116 L+ ++e+ivlvhy+e GAY44136.1 112 LDPAYEHIVLVHYRE 126 ***********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 973 aa Download sequence
MQGGYDVDIL FREAQTRWLK PAEVLFILQN YDKYELTQEP PQKPNSGSLF LFNKRVLRFF 60 RKDGHNWRKK KDGRAVGEAH ERLKVGNAEA LNCYYAHGEQ NPNFQRRSYW MLDPAYEHIV 120 LVHYREITEG RPSPGSVVVS PGASSTFTLS PASYVTPNPG PTSLKSDFYE PYQSISSPSS 180 IEVTSEMASK DNAVDSKGGS TSSEAEVSQA LRKLKEQLSL NDDMFEEIDS LSRQDLDSES 240 KISQQDQFRA FLQSPEYVVQ EEYKGGHAGF QDQSNNLVMH QDAGYDGKHL QQSYGHGYAV 300 GSKGPLSWED MLESCENASG VESQDKPLSS CWREPVEEQE LSCWPNFNGS IEYPSLLMPQ 360 EVKKFEIPEY SSLIGTQQTN SNYTTIFDQD HIGVPLEADL RLTVAQKQKF AIREISPDWG 420 YANESTKVII VGSFLCDPSE SAWSCMFGDT EVPLQIIQEG VIRCEAPPRL PGKVTLCITS 480 GNRESCSEVK EFDYRVKPNS YDNWSQKEAT KSHDELLLLV RFVQMLLSDS SVNKEEGVEL 540 GYHELRGMKA DDDLWGQVID SLLVGSGNSL DTIDWLLQEV LKDKLQQWLS SKSLRESDQP 600 GCSLSKKEQG IIHMVAGLGF EWALNPILSC GVSINFRDIN GWTALHWAAR FGREKMVAAL 660 LASGASAGAV TDPNPLDPTG RTPAFIAASS GHKGLAGYLS EVALTSHLSS LTLEESELSK 720 NSAEVQAEIT VNSISNGNIS STEDQLSLKD TLAAVRNAAQ AAARIQAAFR AHSFRKRQQR 780 DLAAIGAGLD EYGINPDDIP GLSAISKLAF RNARDHNSAA LSIQKKYRGW KGRKDYLAIR 840 QKVVKIQAHV RGYQVRKKYK VIWAVGVLDK VILRWRRKGV GLRGFRPETE SNDESDDEDI 900 LKVFRRQKVD ATIDESVSRV LSMVDSPTAR NQYRRMLERY RQAKAELGET SEAAALSAGD 960 AVDMDDESTY RFV

Sequence ? help Back to Top

Protein Sequence Length: 973 aa Download sequence

MQGGYDVDIL FREAQTRWLK PAEVLFILQN YDKYELTQEP PQKPNSGSLF LFNKRVLRFF  60
RKDGHNWRKK KDGRAVGEAH ERLKVGNAEA LNCYYAHGEQ NPNFQRRSYW MLDPAYEHIV  120
LVHYREITEG RPSPGSVVVS PGASSTFTLS PASYVTPNPG PTSLKSDFYE PYQSISSPSS  180
IEVTSEMASK DNAVDSKGGS TSSEAEVSQA LRKLKEQLSL NDDMFEEIDS LSRQDLDSES  240
KISQQDQFRA FLQSPEYVVQ EEYKGGHAGF QDQSNNLVMH QDAGYDGKHL QQSYGHGYAV  300
GSKGPLSWED MLESCENASG VESQDKPLSS CWREPVEEQE LSCWPNFNGS IEYPSLLMPQ  360
EVKKFEIPEY SSLIGTQQTN SNYTTIFDQD HIGVPLEADL RLTVAQKQKF AIREISPDWG  420
YANESTKVII VGSFLCDPSE SAWSCMFGDT EVPLQIIQEG VIRCEAPPRL PGKVTLCITS  480
GNRESCSEVK EFDYRVKPNS YDNWSQKEAT KSHDELLLLV RFVQMLLSDS SVNKEEGVEL  540
GYHELRGMKA DDDLWGQVID SLLVGSGNSL DTIDWLLQEV LKDKLQQWLS SKSLRESDQP  600
GCSLSKKEQG IIHMVAGLGF EWALNPILSC GVSINFRDIN GWTALHWAAR FGREKMVAAL  660
LASGASAGAV TDPNPLDPTG RTPAFIAASS GHKGLAGYLS EVALTSHLSS LTLEESELSK  720
NSAEVQAEIT VNSISNGNIS STEDQLSLKD TLAAVRNAAQ AAARIQAAFR AHSFRKRQQR  780
DLAAIGAGLD EYGINPDDIP GLSAISKLAF RNARDHNSAA LSIQKKYRGW KGRKDYLAIR  840
QKVVKIQAHV RGYQVRKKYK VIWAVGVLDK VILRWRRKGV GLRGFRPETE SNDESDDEDI  900
LKVFRRQKVD ATIDESVSRV LSMVDSPTAR NQYRRMLERY RQAKAELGET SEAAALSAGD  960
AVDMDDESTY RFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein