PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY44135.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

CAMTA

Protein Properties

Length: 937aa MW: 104436 Da PI: 5.7016

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY44135.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176.9	2.6e-55	13	126	4	116
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywl 101 e ++rwlk+ e++ iL+n++k+elt+e++++p+sgsl+L+n++++r+frkDG++w+kkkdg++v E+he+LKvg+ e+l+cyYah+e+np+fqrr+yw+ GAY44135.1 13 EaQTRWLKPAEVLFILQNYDKYELTQEPPQKPNSGSLFLFNKRVLRFFRKDGHNWRKKKDGRAVGEAHERLKVGNAEALNCYYAHGEQNPNFQRRSYWM 111 5599********************************************************************************************* PP CG-1 102 Leeelekivlvhyle 116 L+ ++e+ivlvhy+e GAY44135.1 112 LDPAYEHIVLVHYRE 126 ***********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 937 aa Download sequence
MQGGYDVDIL FREAQTRWLK PAEVLFILQN YDKYELTQEP PQKPNSGSLF LFNKRVLRFF 60 RKDGHNWRKK KDGRAVGEAH ERLKVGNAEA LNCYYAHGEQ NPNFQRRSYW MLDPAYEHIV 120 LVHYREITEG RPSPGSVVVS PGASSTFTLS PASYVTPNPG PTSLKSDFYE PYQSISSPSS 180 IEVTSEMASK DNAVDSKGGS TSSEAEVSQA LRKLKEQLSL NDDMFEEIDS LSRQDLDSES 240 KISQQDQFRA FLQSPEYVVQ EEYKGGHAGF QDQSNNLVMH QDAGYDGKHL QQSYGHGYAV 300 GSKGPLSWED MLESCENASG VESQEVKKFE IPEYSSLIGT QQTNSNYTTI FDQDHIGVPL 360 EADLRLTVAQ KQKFAIREIS PDWGYANEST KVIIVGSFLC DPSESAWSCM FGDTEVPLQI 420 IQEGVIRCEA PPRLPGKVTL CITSGNRESC SEVKEFDYRV KPNSYDNWSQ KEATKSHDEL 480 LLLVRFVQML LSDSSVNKEE GVELGYHELR GMKADDDLWG QVIDSLLVGS GNSLDTIDWL 540 LQEVLKDKLQ QWLSSKSLRE SDQPGCSLSK KEQGIIHMVA GLGFEWALNP ILSCGVSINF 600 RDINGWTALH WAARFGREKM VAALLASGAS AGAVTDPNPL DPTGRTPAFI AASSGHKGLA 660 GYLSEVALTS HLSSLTLEES ELSKNSAEVQ AEITVNSISN GNISSTEDQL SLKDTLAAVR 720 NAAQAAARIQ AAFRAHSFRK RQQRDLAAIG AGLDEYGINP DDIPGLSAIS KLAFRNARDH 780 NSAALSIQKK YRGWKGRKDY LAIRQKVVKI QAHVRGYQVR KKYKVIWAVG VLDKVILRWR 840 RKGVGLRGFR PETESNDESD DEDILKVFRR QKVDATIDES VSRVLSMVDS PTARNQYRRM 900 LERYRQAKAE LGETSEAAAL SAGDAVDMDD ESTYRFV

Sequence ? help Back to Top

Protein Sequence Length: 937 aa Download sequence

MQGGYDVDIL FREAQTRWLK PAEVLFILQN YDKYELTQEP PQKPNSGSLF LFNKRVLRFF  60
RKDGHNWRKK KDGRAVGEAH ERLKVGNAEA LNCYYAHGEQ NPNFQRRSYW MLDPAYEHIV  120
LVHYREITEG RPSPGSVVVS PGASSTFTLS PASYVTPNPG PTSLKSDFYE PYQSISSPSS  180
IEVTSEMASK DNAVDSKGGS TSSEAEVSQA LRKLKEQLSL NDDMFEEIDS LSRQDLDSES  240
KISQQDQFRA FLQSPEYVVQ EEYKGGHAGF QDQSNNLVMH QDAGYDGKHL QQSYGHGYAV  300
GSKGPLSWED MLESCENASG VESQEVKKFE IPEYSSLIGT QQTNSNYTTI FDQDHIGVPL  360
EADLRLTVAQ KQKFAIREIS PDWGYANEST KVIIVGSFLC DPSESAWSCM FGDTEVPLQI  420
IQEGVIRCEA PPRLPGKVTL CITSGNRESC SEVKEFDYRV KPNSYDNWSQ KEATKSHDEL  480
LLLVRFVQML LSDSSVNKEE GVELGYHELR GMKADDDLWG QVIDSLLVGS GNSLDTIDWL  540
LQEVLKDKLQ QWLSSKSLRE SDQPGCSLSK KEQGIIHMVA GLGFEWALNP ILSCGVSINF  600
RDINGWTALH WAARFGREKM VAALLASGAS AGAVTDPNPL DPTGRTPAFI AASSGHKGLA  660
GYLSEVALTS HLSSLTLEES ELSKNSAEVQ AEITVNSISN GNISSTEDQL SLKDTLAAVR  720
NAAQAAARIQ AAFRAHSFRK RQQRDLAAIG AGLDEYGINP DDIPGLSAIS KLAFRNARDH  780
NSAALSIQKK YRGWKGRKDY LAIRQKVVKI QAHVRGYQVR KKYKVIWAVG VLDKVILRWR  840
RKGVGLRGFR PETESNDESD DEDILKVFRR QKVDATIDES VSRVLSMVDS PTARNQYRRM  900
LERYRQAKAE LGETSEAAAL SAGDAVDMDD ESTYRFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein