PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY43998.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 369aa MW: 40854.7 Da PI: 5.6759

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY43998.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	38.9	2e-12	11	38	28	55
G2-like 28 tPktilelmkvkgLtlehvkSHLQkYRl 55 Pk+il+lm+v+ Lt+e+v+SHLQkYRl GAY43998.1 11 GPKKILDLMNVPWLTRENVASHLQKYRL 38 5**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MTCSVCLAEV GPKKILDLMN VPWLTRENVA SHLQKYRLYL TRLQKDELKT SVGGIKQKDS 60 PSKDSAASFG IQNSITVHHH NDVSNGGYRF SGSNSVVQNV DAKSLEGDVK GIDTIPVTGH 120 KRVLTVDIPN SHKARCSQIG FSGSFVPGHS DVNFTSFDSA IPTQPWSEVS ETQFQHEHKP 180 LRLENDFTQL PLPGPRHHIQ VDCIQSGPSA SSKPSVVDKD NLKPFDCTYK SNYPNAIPIG 240 SAVDTFPVQT TSPIVNHQPF EPIARTTSSM KSQGLNLSCI PDLEAAQRNI NWGVGSSLTS 300 LDEDLQLCWL QGDCFAMNLG LQDINFSEYN DPALNSEVPF HLYDTMRFDY EHYYDPTECP 360 IIDQGLFIA

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MTCSVCLAEV GPKKILDLMN VPWLTRENVA SHLQKYRLYL TRLQKDELKT SVGGIKQKDS  60
PSKDSAASFG IQNSITVHHH NDVSNGGYRF SGSNSVVQNV DAKSLEGDVK GIDTIPVTGH  120
KRVLTVDIPN SHKARCSQIG FSGSFVPGHS DVNFTSFDSA IPTQPWSEVS ETQFQHEHKP  180
LRLENDFTQL PLPGPRHHIQ VDCIQSGPSA SSKPSVVDKD NLKPFDCTYK SNYPNAIPIG  240
SAVDTFPVQT TSPIVNHQPF EPIARTTSSM KSQGLNLSCI PDLEAAQRNI NWGVGSSLTS  300
LDEDLQLCWL QGDCFAMNLG LQDINFSEYN DPALNSEVPF HLYDTMRFDY EHYYDPTECP  360
IIDQGLFIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	4e-44	ARR-B family protein