PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY43997.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ARR-B | ||||||||
Protein Properties | Length: 584aa MW: 65447.8 Da PI: 6.0617 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 76.6 | 3.1e-24 | 200 | 253 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl GAY43997.1 200 KARVVWSIDLHQKFVKAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253 68*******************.9*******************************8 PP | |||||||
2 | Myb_DNA-binding | 36.7 | 9.9e-12 | 202 | 252 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ GAY43997.1 202 RVVWSIDLHQKFVKAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 252 678***********************************************7 PP | |||||||
3 | Response_reg | 77.2 | 5.9e-26 | 20 | 128 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+ + +++l+++l+k y ev+++ +++al ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ Ga GAY43997.1 20 VLVVDDDLAWLKILEKMLKKCSY-EVTTCGLARDALSLLRERKdgYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGAC 114 89*********************.***************999999**********************6644.8************************ PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ ++el++ GAY43997.1 115 DYLLKPIRMKELRN 128 ***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 584 aa Download sequence |
MENGFSSPRN DTFNPAGLRV LVVDDDLAWL KILEKMLKKC SYEVTTCGLA RDALSLLRER 60 KDGYDIVISD VNMPDMDGFK LLEHVGLEMD LPVIMMSVDG ETSRVMKGVQ HGACDYLLKP 120 IRMKELRNIW QHVFRKRIHE VRDIENIEGF ESIHMTRSGS DQSVDGPLLT GEDLTSVRKR 180 KDAENRHDDR DCGDASSTKK ARVVWSIDLH QKFVKAVNQI GFDKVGPKKI LDLMNVPWLT 240 RENVASHLQK YRLYLTRLQK DELKTSVGGI KQKDSPSKDS AASFGIQNSI TVHHHNDVSN 300 GGYRFSGSNS VVQNVDAKSL EGDVKGIDTI PVTGHKRVLT VDIPNSHKAR CSQIGFSGSF 360 VPGHSDVNFT SFDSAIPTQP WSEVSETQFQ HEHKPLRLEN DFTQLPLPGP RHHIQVDCIQ 420 SGPSASSKPS VVDKDNLKPF DCTYKSNYPN AIPIGSAVDT FPVQTTSPIV NHQPFEPIAR 480 TTSSMKSQGL NLSCIPDLEA AQRNINWGVG SSLTSLDEDL QLCWLQGDCF AMNLGLQDIN 540 FSEYNDPALN SEVPFHLYDT MRFDYEHYYD PTECPIIDQG LFIA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-150 | ARR-B family protein |