PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43774.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 294aa    MW: 32448.1 Da    PI: 6.7895
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43774.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.72.8e-10204250755
                 HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 ++ ++RR+ri +++  L+el+P+ +   +++ ++ +++LekA+ Y+k Lq
  GAY43774.1 204 IAAKNRRERISERLKILQELVPNgS---KAGLVDLVTMLEKAISYVKFLQ 250
                 5679*******************88...999******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MALARETCAF KEKVYGDLSS PGSEKASGFV KSIGMSNTSS PSSANSNGYA FHNAEEVRDS  60
LINFKSGHDH FMHANASNLL SFEQNETKDD EYSMWEGNFN QINQKYSSDH RLMEDFNCFD  120
SASNYGFMIN NSARDCHGDW LYTEATAVTD TILESGSQDA SSSLKRPNTG DSMQAVKKQC  180
AIAATKKTNN KQKTSAPPKD PQSIAAKNRR ERISERLKIL QELVPNGSKA GLVDLVTMLE  240
KAISYVKFLQ LQVKVLATDE FWPVQGGKAP DISQVREAID AILSSQRDRS SSSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.11e-58bHLH family protein