PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43690.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 238aa    MW: 26927.7 Da    PI: 7.5037
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43690.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.11e-1066112354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+E+rRR+riNs +++Lr++l  +      Kl+Ka+ L ++v+ +++L
  GAY43690.1  66 KNHKEAEKRRRERINSHLNKLRSILSCN-----SKLDKASLLARVVQRVREL 112
                 58***********************997.....7***********9998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MQPENSELYR FLAQNGVGYY GFPGSACEFS SMMQQSFCSS SSYSFPLEVS GLTETTPEDR  60
ALAALKNHKE AEKRRRERIN SHLNKLRSIL SCNSKLDKAS LLARVVQRVR ELKEQTIELT  120
EVESFPSETD EITVLASSDY SSDGTLIFKA SLCCEDRSDL LPDIIEILKS LHLKTLKAEM  180
VTLGGRIRNV LIIAAEKDHS IESVHFLQNA LKSLLERSNS SDRSKRRRVL DHKIMIQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1225229KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.12e-88bHLH family protein