PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43661.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family G2-like
Protein Properties Length: 322aa    MW: 34517.1 Da    PI: 6.8817
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.61.9e-30113166155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  GAY43661.1 113 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 166
                 59*******************.********************************8 PP
2Myb_DNA-binding482.8e-15115165148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
       GAY43661.1 115 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 165
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MREDDSNWFA RWEEDLPSYE ELIPLSQTLI SPDLAVAFDI RNPVNGNGNG NGNALSQHQQ  60
LQQQQPLTPT NNNNNSNSNN NNPLGQSDFA AENSAEMGSG GAGGDEPART LKRPRLVWTP  120
QLHKRFVDAV AHLGIKNAVP KTIMQLMSVD GLTRENVASH LQKYRLYLKR MQGLSGGGGG  180
GAGGVNGGGA GAAGVNADPA TDHLFASSPV PAHFLHPGAR GNSDHFLPYV PVAALHQQQM  240
AVAPAVGNPH LQGHQYHRQM SHFGSPANGQ FEHHLFARQA QPQQVHRMGA PVHSTVPSSY  300
VEDLESANGG RKVLTLFPTG DD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.11e-102G2-like family protein