PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY43575.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 248aa MW: 27561.5 Da PI: 6.177 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.6 | 1.5e-18 | 74 | 124 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g+ GAY43575.1 74 TYRGVRMRQ-WGKWVSEIREPRK---KSRIWLGTFATPEMAARAHDVAALAIKGH 124 69****998.**********843...6***********************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MEVSLNTENE AQATTSSSHP CSARESTSSS SSSPTKTVKS FKRIIIQEEK TKTASDNDHH 60 ESKTRKVSDL KHPTYRGVRM RQWGKWVSEI REPRKKSRIW LGTFATPEMA ARAHDVAALA 120 IKGHSAYLNF PELAHELPRP ATSSPKDIQA AAAKAAAIVS LPKGQELTNP PSPASTVTSH 180 DTQESASSPL LNNDDDDAFF DLPDLLLDGR HQMDELWDSF SWQQLTEPVS EPVGFGFWYD 240 QEPCHYNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35700.1 | 8e-49 | ERF family protein |