PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY43483.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 367aa MW: 42560.2 Da PI: 6.7938

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY43483.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.4	1.1e-56	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv++yL+kkv++k+++l +vik+vd+yk+ePwdL++ k+ + e++ewyfFs++dkky+tg+r+nratk+g+Wkatg+dk+++s + GAY43483.1 7 VPPGFRFHPTDEELVDYYLRKKVASKRIDL-DVIKDVDLYKIEPWDLQElcKIGSeEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYS-R 103 69**************************.9***********954555552555**********************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 ++l+g++ktLvfykgrap+g+k+dW+mheyrle GAY43483.1 104 HSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 89***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIDLDVIK DVDLYKIEPW DLQELCKIGS 60 EEQNEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YSRHSLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETNEN GTPQARWVVC RVFKKRMAVV RQMGDYESPC NWYDDQLSFI 180 PEIDDHSPGR RIPQPFTQYH HLHYPCKQEL ELQYNMSHIH HHDAFLQLPQ LESPKVPQST 240 AGVSCNSVVP YAYDRATLQS STLTQEDQHS TQQGHQAQGL NSSLYSNNNN DQAVDQVTDW 300 RVLDKFVASQ LSHEDASKEN NYSNAAADHF HVDEQMNMQG NGSNTRVEIA QEYASTSTSS 360 CQIDLWK

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIDLDVIK DVDLYKIEPW DLQELCKIGS  60
EEQNEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YSRHSLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETNEN GTPQARWVVC RVFKKRMAVV RQMGDYESPC NWYDDQLSFI  180
PEIDDHSPGR RIPQPFTQYH HLHYPCKQEL ELQYNMSHIH HHDAFLQLPQ LESPKVPQST  240
AGVSCNSVVP YAYDRATLQS STLTQEDQHS TQQGHQAQGL NSSLYSNNNN DQAVDQVTDW  300
RVLDKFVASQ LSHEDASKEN NYSNAAADHF HVDEQMNMQG NGSNTRVEIA QEYASTSTSS  360
CQIDLWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-158	NAC family protein